21 July 2020

SeaLifeBase at 15: Looking back at its wealth of data





Numbers can speak a lot. 

SeaLifeBase, a biodiversity information system on the world's marine organisms other than fish, started in 2005. 

It's patterned after the well-known FishBase, the world's leading biodiversity information system on all fishes. 

It took a lot of work to make this database possible -- with dozens of staff and hundreds of collaborators around the world.

It's been 15 years since then. 

Time flies, right?

We can now look back and dip into the wealth of data which can only become more important in the years to come.

SeaLifeBase now covers 76,000 marine species (apart from finfish) with 56,000 common names backed up by 36,000+ references. Globally, we now have 300+ collaborators who helped us make available 13,000+ pictures. 

SeaLifeBase and FishBase are freely available.

If you're keen to learn more about non-fish marine organisms, from the charismatic sea turtles down to the fascinating world of meiofauna, be sure to share this resource.


16 July 2020

Coronavirus: boon and bane for sea turtles



The global pause in the last months has seen an overall resurgence in water and air quality around the world.

It's also a breath of fresh air for marine life.

This has been evident in major ecosystems like River Ganges, where, in some places, the waters have become drinkable again for the first time in two decades [1].

Horseshoe crabs have seen stabilization in its population in Delaware Bay. A precarious respite, it's important though that there's no resurgence in fishing of this dinosaur age relic since its blue blood is crucial to meeting the growing demand for the production of safe coronavirus vaccine [1].

Quieter oceans have also led to the resurgence of 2000 dolphins off the coast of Fujairah in the UAE [2], superpod of 350 sperm whales (Physeter macrocephalus) off Sri Lanka [3], and more sightings of endangered dugongs (Dugong dugon) off the coast of Thailand [4].

Despite all these good news, giving wildlife time and space to recover can be a double-edged sword for some animals. 

This is the case for sea turtles [5].

Photo of a green sea turtle (Chelonia mydas) hatchling, Tortuguero National Park, Costa Rica,  from Forbes



















The logic is that beach closures would be a good thing for these creatures since this would mean less disturbance to them [5]. True enough. This has been the case in one beach in Thailand where 11 leatherback sea turtle (Dermochelys coriacea) nests have been found since November, the highest record in the past two decades. No such nests had been recorded in the last five years. A real boon. [6,7].

On the other side, the pandemic also meant hampering important research and conservation projects [5,8].

In the case of Turtle Island Restoration Network (TIRN), 300 volunteers are typically enlisted to monitor hundreds of kilometers of beaches in Texas. With the onset of COVID-19, however, only two full-time staff are left to patrol the stretches of beach once a week [5].

This poses a huge threat to the critically endangered Kemp's ridley sea turtles (Lepidochelys kempii) since the transfer of their eggs to the hatchling facility is curtailed. Poachers are also likely to steal eggs for income. Beach closures also mean slow response to the threats they are facing [5].

Many turtle conservation groups are also hard hit financially [5,9]. Budgets are usually obtained from volunteer programs which have come to a complete halt due to travel bans [5,10]. Along with this is loss of donations from larger institutions, drying up funding reserves for conservation [5]. This is most critical for projects that have taken decades of work for sea turtle populations to recover [9].


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[1] Degnarain, N. (2020, May 16). Six places where oceans, rivers and marine life have rebounded during the coronavirus pandemic.  Forbes. Retrieved from https://tinyurl.com/y8hdjm8p

[2] Haza, R. (2020, April 14). Watch: rare albino Risso's dolphin spotted off Fujairah coast. The National. Retrieved from https://tinyurl.com/ya6vvkb3

[3] Rodrigo, M. (2020, May 6). Researchers miss out on sperm whale superpod in Sri Lanka amid pandemic. Mongabay. Retrieved from https://tinyurl.com/y8ed449s

[4] The Star. (2020, April 27). Thai oceans see more fish and dugongs amid coronavirus closures. Retrieved from https://tinyurl.com/y73zjl39

[5] Owens, B. (2020, May 6). COVID-19 is not all good for wildlife. Hakai Magazine. Retrieved from https://tinyurl.com/ycap8owy

[6] Geggel, L. (2020, April 21). Baby leatherback sea turtles thriving due to COVID-19 beach restrictions. Live Science. Retrieved from https://tinyurl.com/y9jwte9d

[7] The Guardian (2020, April 20). Coronavirus lockdown boosts numbers of Thailand's rare sea turtles. Retrieved from https://tinyurl.com/y9z4bdcd

[8] Daffurn, E. (2020, April 27). COVID-19: Good or bad for the ocean? Scuba Diver Life. Retrieved from https://tinyurl.com/ya2ljun7

[9] Sea Turtle Conservancy (2020, June 1). Sea turtle conservation work in Tortuguero threatened due to COVID-19. Retrieved from https://tinyurl.com/yamjeg6p

[10] Sunkara, L. (2020, April 29). COVID-19 travel restrictions are further endangering sea turtles. How to help. Forbes. Retrieved from https://tinyurl.com/y9xk2tyj




30 June 2020

SeaLifeBase Turns 15!






The ocean is teeming with life that one cannot possibly fathom all its deepest secrets. 

But if data is crunched into its meaty bits, made sense of and presented cohesively, it is certain to be useful in marine studies and conservation. 

Such have been the roles of FishBase and SeaLifeBase, two online global biodiversity information systems that, together, provide biological and ecological information on more than 110,000 marine species.

Last month, video highlighting the origin and evolution of FishBase from its conceptualization in the late 1980s to the present. 

Now, it is SeaLifeBase’s turn!

SeaLifeBase covers most marine species in the world apart from finfish (and notably those that are exploited, threatened, endemic and charismatic). 
This responded to making sure all remaining sea creatures of the world other than fishes can share the limelight. 
In essence, SeaLifeBase emulates the highly commended framework of FishBase, aiming to provide key information on scientific and common names, distribution, ecology and life history data for all multi-celled organisms of the world’s oceans.
It has been around since 2005, and to date, has been strengthened by contributions from over 300 collaborators from all around the world.
Embracing the gift of sharing free and relevant information its proponents have perpetuated, SeaLifeBase team carries with it the goal of forming meaningful collaborations and providing relevant and far-reaching information to attain its long-term goal of completing all large marine ecosystems.

We hope you get to learn more about the origin of SeaLifebase, its evolution and the people behind the scenes that brought this project to life, adding value to students, researchers, fisheries managers, NGOs and enthusiasts alike. 

Enjoy the video!






31 January 2020

The Missing Biography: Where Do Baby Turtles Go During Their 'Lost Years'?





The life of a sea turtle begins as it hatches within the buried sand and instinctively sprints into the water amidst a gauntlet of predators. But many survive... then vanishes, their movements secretly held by the vast ocean.

Depending on the species, a sea turtle spends 1-15 years in the open sea, the so-called ‘lost years’ — the period that ensues after the turtles break free from their eggs to reach the open ocean until the time they come back as large juveniles to their feeding grounds near coastlines. Scientists find it critical to understand this because it serves as the foundation of sea turtle populations. Sea turtles live long lives so understanding this missing part of their ‘biography’ and the threats they may encounter is important to inform conservation efforts and guide policies.

According to Katherine Mansfield, who has studied turtles for more than 20 years, the challenge in completing the turtles’ biographies is that it’s just difficult to survey an entire ocean.

But they did it.

Figure from Mansfield et al. (2014)

She and her team of researchers from the University of Central Florida fit 17 newborn loggerheads with tiny satellite tags. It took them a long time to perfect this. What they realized is that turtle’s shells are made of keratin (as our fingernails are). So what they did is seek a collaborator’s manicurist, and, with her brilliant idea, they were able to fit the satellite tags using an acrylic base coat that seals the shell from peeling. The tags lasted for more than 7 months.

These efforts produced a map which clearly shows the movements of loggerheads for 27 to 220 days.

What Mansfield found out is that the basic overall pattern of movement of loggerheads coincides with previous knowledge, but there were significant nuances in the path each individual turtle takes. 

For instance, contrary to common knowledge that turtles go straight and fast to the North Atlantic Gyre (and they’re mostly right), it turns out they took their time running in local circles, even taking them away from the gyre to the Sargasso Sea.

Sargassum
, a type of brown algae, is a favorable habitat for baby turtles since it provides shelter against predators. It's also a haven for the cold-blooded turtles because the warmer waters of the seaweed-filled surface allow them to grow faster and reach sexual maturity earlier.   

Unraveling clues where baby turtles go during their 'lost years' and have it mapped out has been a feat for Mansfield and her team. There are more questions though. So after 5 years, she and a large team of researchers  took it a notch higher.

They developed a computer model that predicts where sea turtle hatchlings go after they leave Florida's shores.

That's for our next blog.

Stay tuned.

Keen to learn more about these fascinating turtles? You can learn more HERE.



________

Mansfield, K. L., Wyneken, J., Porter, W. P., & Luo, J. (2014). First satellite tracks of neonate sea turtles redefine the ‘lost years’ oceanic niche. Proceedings of the Royal Society B: Biological Sciences, 281(1781), 20133039.

Putman, N. F., Seney, E. E., Verley, P., Shaver, D. J., López
Castro, M. C., Cook, M., ... & Peña, L. J. (2019). Predicted distributions and abundances of the sea turtle ‘lost years’ in the western North Atlantic Ocean. Ecography 42:1-12.

Science Daily (2019 Dec 23). Where do baby sea turtles go? New research technique may provide answers. Retrieved from http://bit.ly/37Mpcls

Yong, Ed. (2014 Mar 4). Where do Baby Turtles Go During Their Lost Years? Retrieved from https://on.natgeo.com/2uM5K9I 

Q-QUATICS IS HIRING!





Q-Quatics is looking for three (3) Research Assistants and one (1) Software Engineer.

For qualifications and requirements click on the photo above or see HERE. We are hoping to attract interest from the widest pool of young talents.

Work location is here in Los Ba
ños, Laguna, Philippines. 

Deadline of the application process is on 29 February 2020.
**********
Quantitative Aquatics, Inc. (www.q-quatics.org) is a non-stock, non-profit, non-governmental organization established in the Philippines in February 2017. Q-quatics was created to support the assembly and dissemination of key data on living aquatic resources for the development of research tools in collaboration with international partners. As such, Q-quatics manages the global biodiversity information systems FishBase (www.fishbase.org), SeaLifeBase (www.sealifebase.org), and the global aquatic biogeography initiative, AquaMaps (www.aquamaps.org).

Q-quatics also supports the cutting-edge databases and research developed by the Sea Around Us (www.seaaroundus.org), which provides policy options for marine fisheries resources, their sustainable use and possible responses to climate change. As such, it partners with the Sea Around Us in identifying projects that would help initiate or maintain research on global fisheries and biodiversity conservation.





 

15 November 2019

How Do You Weigh A Living Whale?




Credits to Fredrik-Christiansen (Photo from Oceanographic Magazine)

The obvious answer is that scientists can't really use a scale.

For starters, dead whales can weigh as much as 210 kg to a whopping 160 t. Besides, measurements can be inaccurate given the physical distortion of carcasses caused by bloating and deflation.

But scientists have something new in their arsenal.

Something that can be used above the sea...

But first, let’s learn about how whales are weighed in the past.

The only way to get data on the body mass of whales was to weigh dead or stranded individuals. Studying blue whales, for instance, was limited to dead specimens from whaling operations, fisheries bycatch and beach strandings.

This can be especially limiting with scientists boxed from collecting longitudinal data over a whale's lifespan. This has prevented the inclusion of body mass in many studies in ecology, physiology and bioenergetics.

But now scientists can accurately estimate the weight of free-living whales.

The answer? 

Drones.

Scientists took aerial photos of 86 southern right whales off the coast of Península Valdés, Argentina.

The waters were clear and the sheer number of whales gathering every winter to breed allowed for the measurement of both the dorsal and lateral sides of the whales.

With crisp images, they were able to get data for length, width and height.

These values were then plugged into a model (and voila!) an accurate calculation of whales' body volume and mass.

What's more fascinating is that the parameters of the model can be adjusted to estimate as well the size of other marine mammals, an alternative that can be considered over invasive methods.

This discovery opens a lot of doors for research.

For one, they can now explore the growth of known aged individuals to calculate their body mass increase over time and the energy requirement for growth. They can also peek into the daily energy requirements of whales and derive prey consumption.

Weight data can also provide insights on how chronic stressors influence whale survival and how they can produce offspring.

This innovation also paved the way to recreating a 3D mesh of the whale and a full-color 3D model in the works, which can be used for studying movement and for educational purposes.

SeaLifeBase hosts data on the weight of marine mammals, from blue whale to the dwarf sperm whale, the smallest known whale.

Feel free to explore.

Happy learning!


26 July 2019

A rare and unforgettable sight: The rainbow-colored blanket octopus




What's better than seeing a rare sea creature? 

Well, seeing two of them and capturing them on camera, of course!

The deep sea never fails to amaze us with bouts of often odd and elusive, yet all the more wonderful creatures.

Take the recent sighting of the rare blanket octopus, which the lucky cameraman Joseph Elayani was able to encounter and film in the wild. On a night dive in the open sea at Romblon (Philippines), at depths of 9-22 m [1], he caught sight of not only one but a pair of female rainbow-colored blanket octopus. It was a glorious moment for Elayani as he witnessed the rapidly shifting colors of the arms, from hues of pastel blues and purple to stunning reds and oranges. This change in color is deemed to be the octopus' reaction from the different light levels of the camera or as a strategy to ward off predators [2].

Credits to Joseph Elayani via Cater News




Blanket octopuses are pelagic creatures found in the Atlantic, Mediterranean and the Pacific, in tropical to subtropical waters. They belong to the genus Tremoctopus [3]. It got its name from the sheets of webbing that extend between some of their arms [4]. 

Octopus, in general, are known to be masters of disguise, changing color patters to blend to their environment and escape predators or sneak on their prey or even mimic other species. Blanket octopus, meanwhile, are known to spread their majestic arms out to drive away would-be predators [4].

One of the things that make them odd is the sheer size difference between sexes: while males are less than an inch long, females can grow up to six feet long and weigh up to 40,000 more than males. It's also unusual that they are immune to the stinging cells of the perilous jellyfish Portuguese man-of-war, which it uses as a weapon against predators [4]. 

Current population data on blanket octopus is unknown [4]. For the meantime, immerse in the beauty that these two lovely octopuses have to offer.



We welcome collaboration with marine scientists and enthusiasts alike. If you have more information or photos on blanket octopuses, you can leave us a message at sealifebase[at]gmail[dot]com.

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[1] Good News Pilipinas. Rare rainbow-colored blanket octopus caught on diver’s camera in Romblon waters. Retrieved from https://bit.ly/2Y3HEVL

[2] Best, S. (18 Jun 2019). Stunning rainbow blanket octopuses spotted swimming in depths of ocean. Mirror Retrieved from https://bit.ly/2YiRpKU

[3] Turgeon, D.D.; Quinn, J.F. Jr.; Bogan, A.E.; Coan, E.V.; Hochberg, F.G.; Lyons, W.G.; Mikkelsen, P.M.; Neves, R.J.; Roper, C.F.E.; Rosenberg, G.; Roth, B. (1998). Common and scientific names of aquatic invertebrates from the United States and Canada: Mollusks, 2nd ed. American Fisheries Society (Special publication 26), Bethesda, Maryland. 526 p.

[4] National Geographic. Blanket octopus. Retrieved from https://on.natgeo.com/32VuskK

[5] USA Today (4 June 2019). Rare 'rainbow' blanket octopuses caught on camera in the Phillippines | USA TODAY. Retrieved from https://bit.ly/2L92yem


22 May 2019

The role of biodiversity in human health




The United Nations has marked May 22 as The International Day for Biological Diversity to raise awareness and understanding of biodiversity issues. 

This year's theme, "Our Biodiversity, Our Food, Our Health," focuses on the invaluable role of biological diversity in human health and well-being. We can show our appreciation for the resources nature provides us every day by truly understanding (or simply reminding ourselves) where we get our resources for good health—the food we eat, the water we drink, and the air we breatheBy doing so, we are putting first the species and the ecosystems that keep our health in check and make our lives worthwhile. 

We can be a catalyst of change in small ways, be it by buying local food or using recyclable bags.

Here in SeaLifeBase, we celebrate marine biodiversity, from foraminiferans to cetaceans, from which we depend a lot for our health and well-being. If you're keen to learn more, visit us here.


29 April 2019

Q-quatics welcomes its new researchers!




Two new fresh graduates, Selina De Leon and Fayte Sicnawa, jump on board the Q-quatics team last April 1. They have since been involved in the identification of fishes in partnership with the University of Western Australia and the carry forward of global fisheries catch reconstructions led by the Sea Around Us.

Selina De Leon, a BS Biology graduate, hails from the University of the Philippines Diliman. She took up courses on marine sciences, ichthyology, ecology, biodiversity, and conservation. Selina’s fascination for the ocean started when she saw the iconic BBC documentary series Blue Planet. That made her want to study marine life and experience it up close. Last Aril 2018, she volunteered for the humpback whale research expedition (Balyena.org) in Camiguin Island, Calayan, Cagayan.


Fayte Sicnawa, a member of the Indigenous People of Kalinga, studied BS Biology major in Wildlife Biology at the University of the Philippines Los Baños. Upon graduation, she went on to teach Chemistry, Biology and Environmental Science at Trace College for a year. As a wildlife biologist, she’s aware of the decline in the sheer biodiversity of species in the country. She therefore feels strongly about the need for their conservation. She believes that the training she'll get in Q-quatics would leverage this passion. Today, she’s pursuing a master’s degree in Wildlife Biology.


Welcome aboard,  Selena and Fayte!

20 March 2019

Creature feature: Meet the dumbo octopus



Illustration by Maxeen Bayer based on the Disney character Dumbo

Deep in the ocean floor lives an octopus, its common name derived from the Disney character Dumbo who can fly with its big ears. Just as the sky is for the endearing elephant, the dumbo octopus hails from the deep, steering the waters by flapping its ear-like fins [1].

To date, there are 21 known species of dumbo octopus (Grimpoteuthis) [2]. Being bathypelagic animals, they live 13,000 feet below water (or almost 4000 m) and are rarely seen in shallow waters. They live in tropical to temperate latitudes and have been observed in New Zealand, California, Oregon, Philippines, and in other areas [3].

Dumbo octopus comes in different sizes, shapes, and colors. Its average size is 20 to 30 cm (7.9 to 12 inches) in length and its mantle, either U- or V-shaped. Like other families of octopi, their tentacles are umbrella-shaped, characterized by webbing between their tentacles, which help them navigate while swimming and crawling on the surface. Their ear-like lateral fins also help them propel around the water [4].

Grimpoteuthis has large eyes, about a third the diameter of their head, but it has limited use in the eternal darkness of the deep oceans. However, to defend itself against predators, it uses its ability to change color and camouflage against the ocean floor. When it camouflages, the ears emit a different color than the rest of its body [4].

They are carnivorous, eating isopods, amphipods, bristle worms and more. Their mouth is different from their kin, engulfing their prey rather than grinding and ripping [1].

The male octopus has a special protuberance in one of its 8 tentacles used to deliver the sperm to a female octopus, which the octopus stores until conditions are favorable for laying eggs on shells or small rocks on the seafloor. Young dumbo octopi are large when they are born and must survive on their own. They can live for 3 to 5 years [1].


Very little is known about these creatures. If you have more information on dumbo octopus, SeaLifeBase welcomes collaboration. Kindly send us a message at sealifebase(at)q-quatics(dot)org.


Written by Maxeen Danielle Bayer

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[1] Helmenstine, A.M. (2018, April 24). All about Grimpoteuthis, the dumbo octopus. ThoughtCo. Retrieved from https://bit.ly/2W3CUtP
[2] WoRMS Editorial Board (2019). World Register of Marine Species. Available from http://www.marinespecies.org at VLIZ. Accessed 2019-03-15. doi.10.14284/170
[3] Oceana. Cephalopods, crustaceans and other shellfish: dumbo octopus. Retrieved from https://bit.ly/2Jfo2qM
[4] Ocean Conservancy (2018, October 8). Everything you need to know about the dumbo octopus. Retrieved from https://bit.ly/2OAYNBg
[5] National Geographic (2018, October 29). Rare dumbo octopus shows off for deep-sea submersible. YouTube. Retrieved from https://bit.ly/2u9gcEP

04 March 2019

World Wildlife Day 2019 celebrates marine life




Photo from UNDP

United Nations World Wildlife Day has been celebrating the sheer diversity of plants and animals for six years now by raising awareness on the threats they're facing through a series of events across the globe. 

Inspired by UN's 14th Sustainable Development Goal (SDGs)—life below water—this year marks the first ever World Wildlife Day to celebrate the huge importance of marine life in our everyday lives. It also commemorates the establishment of CITES (Convention on International Trade in Endangered Species of Wild Fauna and Flora), a treaty which underscores the protection of all endangered plants and animals.

This event gives the opportunity to highlight critical issues faced by marine life, commend successful initiatives for their conservation and scale up future endeavors towards sustaining them for future generations.

One of the major concerns that this campaign addresses is plastic pollution, in which 57 countries have already vowed to reduce their use of single-use and non-recoverable plastics.  

It's a step further to know more about the marine species we need to protect. And SeaLifeBase hosts this information. If you're keen to dive deep into the threatened non-fish marine species in the Philippines (and around the world), you may visit SeaLifeBase.

22 February 2019

Who's Got Jellies in their Gut?



Gelatinous zooplankton, loosely termed as jellyfish, can be found throughout world’s oceans, known to cause large blooms. This group includes scyphozoan jellyfish, siphonophores, ctenophores, salps, pyrosomes, and appendicularians [1]. 

If we were asked who dines on these jellies, we might reserve the term ‘belly-full-of jelly’ to charismatic sea turtles (Dermochelys coriacea, Chelonia mydas) and the ocean sunfish (Mola mola). And it's indeed fitting since an adult leatherback turtle, for instance, ingests an average of 330-kg jellyfish wet mass per day or 73% of its body mass [1]. 

With the rise of new technologies in recent years, however, this exclusivity is no longer true: It turns out that not only such massive marine predators get a chunk of their diet from jellyfish. There’s a whole lot on the table, from birds to fishes to worms, joining the feast [1].

New approaches to study the diet of marine animals such as stable isotope analyses or SIA (getting animal tissues to estimate trophic level), animal-borne cameras, remotely operated vehicles or ROVs, and DNA metabarcoding support the finding that a diverse range of marine predators feed on jellies, not incidentally but targeted [1].  

SIA revealed that jellyfish forms a substantial part of the diet of bony fishes Chloroscombrus chrysurus, Thunnus thynnus, Euthynnus alletteratus, Tetrapterus belone, Xiphias gladius and the green sea turtle Chelonia mydas

Animal-borne cameras revealed 42.2% of prey capture for some species of penguins, consuming scyphozoans, salps and ctenophores [1]. 

Metabarcoding showed that jellies make up 20% of food DNA sequences of the two species of albatross, ahead of crustaceans in terms of importance. Meanwhile, next-generation sequencing showed that the endangered European eel Anguilla anguilla has got gelatinous zooplankton in its diet. Seen through powerful ROVs, deep-sea octopus (Haliphron atlanticus) and benthic animals, like echinoderms, crabs, shrimps, amphipods, sea anemones, and worms join the slew of jellyfish predators [1].

Hays et al. 2018 Figure 2A, showing a diverse group of predators worldwide feeding on jellyfish.

Overwhelming evidence of widespread jellyfish consumption throughout the world’s oceans means that jellyfish cannot be simply considered a bycatch, but targeted and opportunistically consumed by many marine predators. However, it's important to note that this shift may be influenced by changing ocean conditions [1]. 

Also, knowing that a growing number of marine life now relies on jellyfish for nutrition signifies their susceptibility to harm, or even death, for mistaking plastic wastes for food [1]. 

These findings are important given that jellyfish holds a huge fraction of the pelagic biomass and have recently increased their abundance worldwide [3]. The study also challenges the common notion that undermines the energetic gain from jellyfish consumption, thus the need to better understand its dietary value [1].

To know more about jellyfishes and other gelatinous zooplankton, visit SeaLifeBase


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[1] Hays, G. C., Doyle, T. K., & Houghton, J. D. (2018). A Paradigm Shift in the Trophic Importance of Jellyfish?. Trends in Ecology & Evolution 33(11):874-884. Retrieved from https://bit.ly/2DCvaY7
 [2] Lewis, A. (2011, January 5). Leatherback turtle feeding. YouTube. Retrieved from https://bit.ly/1vo1QO8